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Getting the following error when trying to install Pandas (0.16.0), which is in my requirements.txt file, on AWS Elastic Beanstalk EC2 instance:

building 'pandas.msgpack' extension

gcc -pthread -fno-strict-aliasing -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -fPIC -D__LITTLE_ENDIAN__=1 -Ipandas/src/klib -Ipandas/src -I/opt/python/run/venv/local/lib/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c pandas/msgpack.cpp -o build/temp.linux-x86_64-2.7/pandas/msgpack.o

gcc: error trying to exec 'cc1plus': execvp: No such file or directory

error: command 'gcc' failed with exit status 1

I'm running on 64bit Amazon Linux 2015.03 v1.3.0 running Python 2.7 and previously ran into this same error on a t1.micro instance, which was resolved when I change to an m3.medium, but I'm running an m3.xlarge so can't be a memory issue.

I have also ensured that gcc is installed as a package in .ebextensions/00_gcc.config:

packages:

   yum:

      gcc: []

      gcc-c++: []

1 Answer

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by (42.4k points)

If you are compiling pandas on Elastic Beanstalk, then have both gcc-c++ and python-devel[]:

packages:

   yum:

      gcc-c++: []

      python-devel: []

Add your python version with it, for example, python36-devel:[]

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